Paraglaciecola hydrolytica strain S66

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola hydrolytica strain S66 is a Gram-negative, aerobic bacterium characterized by its rod shape and motility. This strain is mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. It possesses a single replicon and is categorized as non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse conditions. The ecological significance of Paraglaciecola hydrolytica strain S66 may be related to its enzymatic capabilities, particularly in hydrolytic processes, which are essential for the degradation of organic materials in various environments. Its adaptation to aerobic conditions allows it to thrive in environments with sufficient oxygen, potentially contributing to biogeochemical cycles, particularly in aquatic systems where organic matter decomposition is crucial for nutrient recycling. Overall, the traits of Paraglaciecola hydrolytica strain S66 highlight its role in microbial communities, especially in environments where organic matter is available for breakdown and utilization, further emphasizing the importance of such microorganisms in ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola hydrolytica
Strainstrain S66

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola hydrolytica strain S66


Gene Summary

Adenine Count

1497489 bp

Thymine Count

1514460 bp

Guanine Count

1116870 bp

Cytosine Count

1078095 bp

Genome Length

5221450 bp

Protein-coding Genes

4354 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoamide dehydrogenaseAX660_00005Not AvailableNegative129 - 155050295.0
dihydrolipoamide acetyltransferaseAX660_00010Not AvailableNegative1667 - 332557908.8
pyruvate dehydrogenaseAX660_00015Not AvailableNegative3352 - 602799015.7
transcriptional regulator pdhrAX660_00020Not AvailableNegative6125 - 687728304.4
hypothetical proteinAX660_00025Not AvailableNegative7061 - 788531050.9
n-acetyl-anhydromuranmyl-l-alanine amidaseAX660_00030Not AvailableNegative8053 - 860420734.5
aspartyl proteaseAX660_00035Not AvailablePositive8739 - 921517412.0
galactose mutarotaseAX660_00040Not AvailableNegative9466 - 1053639084.6
gntr family transcriptional regulatorAX660_00045Not AvailableNegative10547 - 1127226658.1
hypothetical proteinAX660_00050Not AvailableNegative11338 - 1223133105.3

Displaying genes 1 – 10 of 4412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm00033514-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PSChemical structure of 4-methyl-5-(2-phosphooxyethyl)-thiazoleNot available
Average221.17Da
Monoisotopic220.9922631Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003657N-acetyl-D-muramate 6-phosphateC11H17NO11PChemical structure of N-acetyl-D-muramate 6-phosphateNot available
Average370.228Da
Monoisotopic370.0555681Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0010316N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8PChemical structure of N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average285.169Da
Monoisotopic285.049326Da

Displaying 1–10 of 13 metabolites

Health Effects

No health effects information available for this bacterium.