Hoeflea olei strain JC234

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea olei strain JC234 is characterized as a rod-shaped bacterium and possesses a single replicon. This trait is significant as it often indicates a streamlined genetic structure, which may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number LQZT00000000.1, which provides a reference for genetic and genomic research. The sequencing information associated with this accession can be crucial for understanding the metabolic pathways and ecological roles of Hoeflea olei, especially in relation to its interactions with its environment. In terms of ecological insight, the rod shape of Hoeflea olei may influence its motility and nutrient uptake in diverse habitats. Rod-shaped bacteria are often associated with specific ecological niches, where their morphology can enhance surface area for absorption and facilitate movement through viscous environments. This morphological trait, coupled with the single replicon, suggests that Hoeflea olei strain JC234 may be well-adapted to specific ecological conditions, possibly including environments rich in organic compounds. Understanding these traits can provide deeper insights into the ecological roles of Hoeflea olei in biogeochemical cycles and its potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea olei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea olei strain JC234


Gene Summary

Adenine Count

814367 bp

Thymine Count

812638 bp

Guanine Count

1549778 bp

Cytosine Count

1546316 bp

Genome Length

4723612 bp

Protein-coding Genes

4184 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorAWJ14_08520Not AvailablePositive600 - 112119077.7
two-component system response regulatorAWJ14_08525Not AvailablePositive1140 - 184426037.4
atpaseAWJ14_08530Not AvailablePositive2001 - 338351787.7
pp_00005AWJ14_08535Not AvailableNegative3458 - 3799Not Available
pyrroline-5-carboxylate reductaseAWJ14_08540Not AvailableNegative3822 - 463427540.5
hypothetical proteinAWJ14_08545Not AvailableNegative4636 - 513618849.2
hypothetical proteinAWJ14_08550Not AvailableNegative5470 - 579011628.8
prolipoprotein diacylglyceryl transferaseAWJ14_08555Not AvailablePositive6028 - 686130280.6
tetr family transcriptional regulatorAWJ14_08560Not AvailablePositive6883 - 798339216.0
polyphenol oxidaseAWJ14_08565Not AvailablePositive8086 - 891029496.7

Displaying genes 1 – 10 of 4184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

9 records
Metabolite IDMetabolite nameStructureCAS number
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm00015513D-3,5/4-trihydroxycyclohexane-1,2-dioneC6H8O5Chemical structure of 3D-3,5/4-trihydroxycyclohexane-1,2-dioneNot available
Average160.125Da
Monoisotopic160.0371734Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm0002665prostaglandin F2alphaC20H33O5Chemical structure of prostaglandin F2alpha0551-11-1
Average353.48Da
Monoisotopic353.2333477Da
BASm0002666prostaglandin H2C20H31O5Chemical structure of prostaglandin H242935-17-1
Average351.464Da
Monoisotopic351.2176977Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00037505-deoxy-D-glucuronateC6H9O6Chemical structure of 5-deoxy-D-glucuronateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0004229CoA-disulfideC42H62N14O32P6S2Chemical structure of CoA-disulfideNot available
Average1524.99Da
Monoisotopic1524.156559Da

Displaying 1–9 of 9 metabolites

Health Effects

No health effects information available for this bacterium.