Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain STEC 1686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1395711 bp
Thymine Count
1389689 bp
Guanine Count
1442638 bp
Cytosine Count
1415294 bp
Genome Length
5643434 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
518 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escv/yscv/hrcv family type iii secretion system export apparatus protein | AML35_04815 | Not Available | Positive | 906031 - 908091 | 76409.5 |
| escn/yscn/hrcn family type iii secretion system atpase | AML35_04820 | Not Available | Positive | 908123 - 909415 | 47573.4 |
| type iii secretion protein | AML35_04825 | Not Available | Positive | 909405 - 909863 | 18290.3 |
| type iii secretion protein | AML35_04830 | Not Available | Positive | 909841 - 910716 | 33444.5 |
| type iii secretion system protein | AML35_04835 | Not Available | Positive | 910716 - 911663 | 36193.4 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | AML35_04840 | Not Available | Positive | 911653 - 912318 | 24496.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | AML35_04845 | Not Available | Positive | 912327 - 912587 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | AML35_04850 | Not Available | Positive | 912589 - 913356 | 28194.8 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | AML35_04855 | Not Available | Positive | 913365 - 914477 | 43024.9 |
| invasion protein | AML35_04860 | Not Available | Negative | 914548 - 914841 | 11117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





