Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0f1 subunit a | ATY41_08350 | Not Available | Positive | 91083 - 91880 | 29499.1 |
| atp f0f1 synthase subunit c | ATY41_08355 | Not Available | Positive | 91932 - 92153 | 7542.41 |
| atp synthase f0f1 subunit b | ATY41_08360 | Not Available | Positive | 92186 - 92758 | 20295.1 |
| atp synthase f0f1 subunit delta | ATY41_08365 | Not Available | Positive | 92758 - 93549 | 27083.7 |
| atp synthase subunit alpha | ATY41_08370 | Not Available | Positive | 93576 - 95213 | 58881.2 |
| atp synthase f0f1 subunit gamma | ATY41_08375 | Not Available | Positive | 95257 - 96156 | 33185.5 |
| atp synthase subunit beta | ATY41_08380 | Not Available | Positive | 96182 - 97645 | 53009.0 |
| atp synthase f0f1 subunit epsilon | ATY41_08385 | Not Available | Positive | 97648 - 97908 | 8836.58 |
| hypothetical protein | ATY41_08390 | Not Available | Positive | 97910 - 98467 | 19552.3 |
| hypothetical protein | ATY41_08395 | Not Available | Positive | 98469 - 99263 | 28212.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
