Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_02825 | Not Available | Negative | 1018694 - 1019014 | 11606.4 |
| hypothetical protein | ATY41_02830 | Not Available | Negative | 1019011 - 1019196 | 6513.98 |
| hypothetical protein | ATY41_02835 | Not Available | Negative | 1019708 - 1020490 | 28865.3 |
| hypothetical protein | ATY41_02840 | Not Available | Negative | 1020540 - 1020776 | 8289.86 |
| hypothetical protein | ATY41_02845 | Not Available | Positive | 1021723 - 1021986 | 9572.33 |
| hypothetical protein | ATY41_02850 | Not Available | Positive | 1022551 - 1022784 | 8309.11 |
| hypothetical protein | ATY41_02855 | Not Available | Negative | 1022924 - 1023202 | 10248.3 |
| hypothetical protein | ATY41_02860 | Not Available | Negative | 1023884 - 1024132 | 8777.76 |
| hypothetical protein | ATY41_02865 | Not Available | Negative | 1024428 - 1024862 | 16419.3 |
| hypothetical protein | ATY41_02875 | Not Available | Negative | 1026735 - 1027301 | 21083.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
