Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_02775 | Not Available | Negative | 1012519 - 1012929 | 14702.0 |
| hypothetical protein | ATY41_02780 | Not Available | Negative | 1012941 - 1013222 | 9909.78 |
| hypothetical protein | ATY41_02785 | Not Available | Negative | 1013376 - 1013594 | 7738.4 |
| hypothetical protein | ATY41_02790 | Not Available | Negative | 1013591 - 1013818 | 7994.81 |
| hypothetical protein | ATY41_02795 | Not Available | Negative | 1014379 - 1014801 | 15079.0 |
| hypothetical protein | ATY41_02800 | Not Available | Negative | 1014798 - 1015910 | 40390.7 |
| hypothetical protein | ATY41_02805 | Not Available | Negative | 1015907 - 1016245 | 11861.8 |
| hypothetical protein | ATY41_02810 | Not Available | Negative | 1016242 - 1016673 | 16207.6 |
| hypothetical protein | ATY41_02815 | Not Available | Negative | 1016670 - 1017455 | 28759.2 |
| recombinase | ATY41_02820 | Not Available | Negative | 1017476 - 1018471 | 37291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
