Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_02675 | Not Available | Negative | 995435 - 996379 | 33536.7 |
| hypothetical protein | ATY41_02680 | Not Available | Positive | 996503 - 997060 | 18963.4 |
| hypothetical protein | ATY41_02685 | Not Available | Negative | 997089 - 997610 | 18331.5 |
| hypothetical protein | ATY41_02690 | Not Available | Negative | 997677 - 998873 | 43343.3 |
| hypothetical protein | ATY41_02695 | Not Available | Negative | 998878 - 1000050 | 38909.6 |
| hypothetical protein | ATY41_02700 | Not Available | Negative | 1000055 - 1000930 | 30142.8 |
| hypothetical protein | ATY41_02705 | Not Available | Negative | 1000906 - 1002132 | 42593.2 |
| hypothetical protein | ATY41_02710 | Not Available | Negative | 1002119 - 1002307 | 6298.68 |
| hypothetical protein | ATY41_02715 | Not Available | Negative | 1002461 - 1002760 | 10938.8 |
| hypothetical protein | ATY41_02720 | Not Available | Negative | 1002761 - 1003219 | 17434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
