Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium-translocating p-type atpase | ATY41_11175 | Not Available | Negative | 862669 - 865347 | 96490.1 |
| hypothetical protein | ATY41_11180 | Not Available | Negative | 866101 - 866286 | 6101.25 |
| hypothetical protein | ATY41_11185 | Not Available | Negative | 866283 - 866699 | 13525.2 |
| hypothetical protein | ATY41_11190 | Not Available | Positive | 866793 - 869303 | 90003.3 |
| hypothetical protein | ATY41_11195 | Not Available | Negative | 869365 - 869931 | 19780.1 |
| hypothetical protein | ATY41_11200 | Not Available | Negative | 870131 - 872668 | 89846.9 |
| hypothetical protein | ATY41_11205 | Not Available | Negative | 872658 - 873719 | 38268.7 |
| hypothetical protein | ATY41_11210 | Not Available | Negative | 873712 - 874266 | 19261.5 |
| hypothetical protein | ATY41_11215 | Not Available | Negative | 874384 - 874965 | 20088.7 |
| esterase | ATY41_11225 | Not Available | Positive | 876831 - 877658 | 29231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
