Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltooligosyl trehalose synthase | ATY41_11055 | Not Available | Positive | 835438 - 837744 | 83646.5 |
| malto-oligosyltrehalose trehalohydrolase | ATY41_11060 | Not Available | Positive | 837741 - 839423 | 61261.2 |
| glycogen debranching enzyme | ATY41_11065 | Not Available | Positive | 839503 - 841548 | 74621.0 |
| hypothetical protein | ATY41_11070 | Not Available | Negative | 841671 - 842339 | 23708.0 |
| phosphatidylglycerophosphatase | ATY41_11075 | Not Available | Positive | 842740 - 843417 | 23594.3 |
| hypothetical protein | ATY41_11080 | Not Available | Negative | 844037 - 844378 | 13118.0 |
| aaa family atpase | ATY41_11085 | Not Available | Negative | 844893 - 845702 | 30000.9 |
| hypothetical protein | ATY41_11095 | Not Available | Negative | 848194 - 848901 | 24582.8 |
| mfs transporter | ATY41_11110 | Not Available | Negative | 850141 - 851385 | 42078.6 |
| hypothetical protein | ATY41_11115 | Not Available | Negative | 851517 - 852770 | 43165.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
