Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_10740 | Not Available | Negative | 780553 - 781035 | 16913.0 |
| hypothetical protein | ATY41_10745 | Not Available | Negative | 781082 - 781789 | 25707.2 |
| hypothetical protein | ATY41_10750 | Not Available | Negative | 781852 - 782538 | 25395.1 |
| aaa family atpase | ATY41_10755 | Not Available | Negative | 782757 - 783566 | 30000.9 |
| hypothetical protein | ATY41_10765 | Not Available | Negative | 785175 - 786197 | 37531.4 |
| hypothetical protein | ATY41_10770 | Not Available | Negative | 786214 - 786396 | 6716.85 |
| hypothetical protein | ATY41_10775 | Not Available | Negative | 787628 - 788281 | 24400.0 |
| hypothetical protein | ATY41_10780 | Not Available | Negative | 788414 - 788734 | 11962.4 |
| hypothetical protein | ATY41_10785 | Not Available | Negative | 788746 - 789027 | 9909.78 |
| hypothetical protein | ATY41_10790 | Not Available | Negative | 789294 - 789656 | 12987.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
