Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_10690 | Not Available | Negative | 775135 - 775521 | 14706.8 |
| hypothetical protein | ATY41_10695 | Not Available | Negative | 775588 - 775779 | 7015.5 |
| hypothetical protein | ATY41_10700 | Not Available | Negative | 775855 - 776550 | 24299.1 |
| hypothetical protein | ATY41_10705 | Not Available | Negative | 776659 - 777093 | 15244.2 |
| hypothetical protein | ATY41_10710 | Not Available | Negative | 777414 - 777752 | 12196.4 |
| hypothetical protein | ATY41_10715 | Not Available | Negative | 777749 - 778126 | 13887.4 |
| hypothetical protein | ATY41_10720 | Not Available | Negative | 778143 - 778466 | 11598.2 |
| hypothetical protein | ATY41_10725 | Not Available | Negative | 778466 - 779395 | 32760.8 |
| hypothetical protein | ATY41_10730 | Not Available | Negative | 779423 - 779791 | 11802.0 |
| hypothetical protein | ATY41_10735 | Not Available | Negative | 779813 - 780370 | 20274.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
