Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_10635 | Not Available | Negative | 763008 - 763547 | 20067.0 |
| hypothetical protein | ATY41_10640 | Not Available | Negative | 764006 - 764677 | 23344.3 |
| hypothetical protein | ATY41_10645 | Not Available | Negative | 764644 - 766764 | 77557.5 |
| penicillin-binding protein | ATY41_10650 | Not Available | Negative | 767358 - 769859 | 87496.1 |
| hypothetical protein | ATY41_10655 | Not Available | Negative | 770154 - 770369 | 7219.05 |
| hypothetical protein | ATY41_10665 | Not Available | Negative | 771347 - 771865 | 18318.3 |
| hypothetical protein | ATY41_10670 | Not Available | Negative | 771873 - 772175 | 10920.0 |
| hypothetical protein | ATY41_10675 | Not Available | Negative | 772175 - 773737 | 52453.7 |
| hypothetical protein | ATY41_10680 | Not Available | Negative | 773779 - 774747 | 31643.8 |
| hypothetical protein | ATY41_10685 | Not Available | Positive | 774785 - 775138 | 12913.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
