Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| segregation and condensation protein b | ATY41_10510 | Not Available | Negative | 738475 - 739089 | 21862.1 |
| chromosome segregation protein scpa | ATY41_10515 | Not Available | Negative | 739079 - 739912 | 30519.4 |
| chromosome partitioning protein | ATY41_10520 | Not Available | Negative | 739902 - 740801 | 32032.5 |
| tyrosine recombinase xerd | ATY41_10525 | Not Available | Negative | 740950 - 741855 | 32384.0 |
| adp-ribose pyrophosphatase | ATY41_10530 | Not Available | Negative | 741852 - 742496 | 23856.8 |
| ctp synthetase | ATY41_10535 | Not Available | Negative | 742496 - 744124 | 58103.1 |
| hypothetical protein | ATY41_10540 | Not Available | Negative | 744385 - 744840 | 16113.6 |
| hypothetical protein | ATY41_10545 | Not Available | Negative | 744947 - 745381 | 15155.5 |
| hypothetical protein | ATY41_10550 | Not Available | Negative | 745378 - 747027 | 58943.4 |
| dna repair protein recn | ATY41_10555 | Not Available | Negative | 747127 - 748830 | 59687.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
