Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_10230 | Not Available | Positive | 682080 - 683999 | 69034.1 |
| hypothetical protein | ATY41_10235 | Not Available | Positive | 684411 - 684989 | 20968.1 |
| hypothetical protein | ATY41_10245 | Not Available | Positive | 686455 - 686997 | 18818.5 |
| hypothetical protein | ATY41_10255 | Not Available | Negative | 688631 - 689095 | 15390.8 |
| hypothetical protein | ATY41_10260 | Not Available | Negative | 689204 - 690079 | 29343.8 |
| hypothetical protein | ATY41_10275 | Not Available | Positive | 692189 - 692407 | 8371.12 |
| hypothetical protein | ATY41_10280 | Not Available | Positive | 692466 - 693029 | 19642.5 |
| hypothetical protein | ATY41_10285 | Not Available | Positive | 693051 - 693365 | 10929.0 |
| hypothetical protein | ATY41_10290 | Not Available | Positive | 693663 - 694997 | 47811.1 |
| hypothetical protein | ATY41_10295 | Not Available | Positive | 696752 - 697381 | 23637.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
