Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_02305 | Not Available | Negative | 608818 - 609021 | 7353.77 |
| abc-atpase uvra | ATY41_02310 | Not Available | Positive | 609729 - 612644 | 106301.0 |
| excinuclease abc subunit c | ATY41_02315 | Not Available | Positive | 612655 - 614625 | 73165.6 |
| glmz(srna)-inactivating ntpase | ATY41_02320 | Not Available | Positive | 614713 - 615600 | 32847.2 |
| sporulation protein | ATY41_02325 | Not Available | Positive | 615657 - 616637 | 35049.1 |
| superoxide dismutase | ATY41_02330 | Not Available | Positive | 616718 - 617344 | 23247.3 |
| glyceraldehyde-3-phosphate dehydrogenase | ATY41_02335 | Not Available | Positive | 617447 - 618457 | 35591.9 |
| phosphoglycerate kinase | ATY41_02340 | Not Available | Positive | 618473 - 619684 | 41902.1 |
| triose-phosphate isomerase | ATY41_02345 | Not Available | Positive | 619747 - 620490 | 25759.5 |
| preprotein translocase subunit secg | ATY41_02350 | Not Available | Positive | 620558 - 620803 | 8483.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
