Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_08125 | Not Available | Negative | 50987 - 52102 | 39991.1 |
| hypothetical protein | ATY41_08130 | Not Available | Positive | 52498 - 53247 | 27419.5 |
| hypothetical protein | ATY41_08135 | Not Available | Positive | 53541 - 54608 | 37013.9 |
| hypothetical protein | ATY41_08140 | Not Available | Positive | 54615 - 55703 | 39694.8 |
| abc transporter permease | ATY41_08145 | Not Available | Positive | 55700 - 57367 | 58470.0 |
| hypothetical protein | ATY41_08150 | Not Available | Positive | 57364 - 58257 | 30780.7 |
| hypothetical protein | ATY41_08155 | Not Available | Positive | 58463 - 59122 | 23684.8 |
| hypothetical protein | ATY41_08160 | Not Available | Positive | 59119 - 60123 | 35492.7 |
| hypothetical protein | ATY41_08165 | Not Available | Positive | 60300 - 61097 | 27477.1 |
| hypothetical protein | ATY41_08170 | Not Available | Positive | 61679 - 62023 | 12021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
