Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_08060 | Not Available | Positive | 36609 - 37637 | 38067.2 |
| hypothetical protein | ATY41_08080 | Not Available | Positive | 41274 - 41462 | 7131.43 |
| hypothetical protein | ATY41_08085 | Not Available | Positive | 41455 - 41811 | 13210.6 |
| hypothetical protein | ATY41_08090 | Not Available | Positive | 42314 - 42769 | 16268.4 |
| hypothetical protein | ATY41_08095 | Not Available | Positive | 42954 - 43691 | 25995.2 |
| hypothetical protein | ATY41_08100 | Not Available | Positive | 43959 - 45356 | 46513.5 |
| hypothetical protein | ATY41_08105 | Not Available | Positive | 45842 - 46390 | 19741.0 |
| n-acetyl-glucosamine transferase | ATY41_08110 | Not Available | Positive | 46387 - 47736 | 50343.0 |
| hypothetical protein | ATY41_08115 | Not Available | Positive | 48013 - 49062 | 37390.0 |
| multidrug transporter | ATY41_08120 | Not Available | Negative | 49245 - 50663 | 53525.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
