Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_09830 | Not Available | Positive | 416893 - 417450 | 19501.0 |
| flagellar protein export atpase flii | ATY41_09835 | Not Available | Positive | 417447 - 418772 | 45577.8 |
| hypothetical protein | ATY41_09840 | Not Available | Positive | 418769 - 419194 | 15298.2 |
| hypothetical protein | ATY41_09845 | Not Available | Positive | 419191 - 419991 | 26349.2 |
| hypothetical protein | ATY41_09850 | Not Available | Positive | 419988 - 421331 | 44862.5 |
| hypothetical protein | ATY41_09855 | Not Available | Positive | 421318 - 421620 | 10775.9 |
| flagellar hook protein | ATY41_09860 | Not Available | Positive | 421798 - 422970 | 38791.7 |
| motility protein | ATY41_09865 | Not Available | Positive | 423053 - 423283 | 8043.73 |
| hypothetical protein | ATY41_09870 | Not Available | Positive | 423336 - 424223 | 31586.6 |
| hypothetical protein | ATY41_09875 | Not Available | Negative | 424147 - 424665 | 18594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
