Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_09475 | Not Available | Negative | 339861 - 340532 | 24526.4 |
| multidrug transporter | ATY41_09480 | Not Available | Negative | 340740 - 342083 | 50177.1 |
| hypothetical protein | ATY41_09485 | Not Available | Negative | 342080 - 343174 | 39356.3 |
| hypothetical protein | ATY41_09490 | Not Available | Negative | 343225 - 343743 | 17769.3 |
| hypothetical protein | ATY41_09495 | Not Available | Negative | 344060 - 344872 | 27160.1 |
| hypothetical protein | ATY41_09500 | Not Available | Positive | 345032 - 345277 | 8945.84 |
| hypothetical protein | ATY41_09505 | Not Available | Negative | 345328 - 345693 | 13069.2 |
| hypothetical protein | ATY41_09510 | Not Available | Positive | 346137 - 346691 | 19140.5 |
| hypothetical protein | ATY41_09515 | Not Available | Positive | 346878 - 349388 | 89153.1 |
| hypothetical protein | ATY41_09520 | Not Available | Negative | 349563 - 349946 | 12754.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
