Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_09425 | Not Available | Positive | 330570 - 330851 | 10258.4 |
| iron transporter feoa | ATY41_09430 | Not Available | Positive | 330997 - 331188 | 6880.41 |
| ferrous iron transporter b | ATY41_09435 | Not Available | Positive | 331185 - 333086 | 67156.2 |
| hypothetical protein | ATY41_09440 | Not Available | Positive | 333083 - 333649 | 19373.3 |
| peroxidase | ATY41_09445 | Not Available | Negative | 333657 - 334877 | 43374.2 |
| hypothetical protein | ATY41_09450 | Not Available | Negative | 334874 - 335374 | 16708.1 |
| hypothetical protein | ATY41_09455 | Not Available | Positive | 335616 - 336062 | 15381.8 |
| hypothetical protein | ATY41_09460 | Not Available | Positive | 336062 - 336718 | 22987.2 |
| hypothetical protein | ATY41_09465 | Not Available | Negative | 337267 - 339186 | 68391.4 |
| hypothetical protein | ATY41_09470 | Not Available | Positive | 339209 - 339532 | 11456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
