Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | ATY41_06455 | Not Available | Positive | 1937729 - 1938268 | 19234.6 |
| rhomboid family protein | ATY41_06460 | Not Available | Positive | 1938436 - 1939149 | 25312.8 |
| septation inhibitor protein | ATY41_06465 | Not Available | Negative | 1939368 - 1939628 | 9825.16 |
| hypothetical protein | ATY41_06470 | Not Available | Positive | 1939805 - 1940554 | 27339.5 |
| para-aminobenzoate synthase | ATY41_06475 | Not Available | Positive | 1940714 - 1941352 | 22544.8 |
| serine/threonine protein kinase | ATY41_06480 | Not Available | Negative | 1941383 - 1943041 | 58486.8 |
| serine/threonine protein kinase | ATY41_06485 | Not Available | Negative | 1943153 - 1944874 | 59528.5 |
| cell division protein ftsi | ATY41_06490 | Not Available | Negative | 1944871 - 1946325 | 50958.4 |
| cell division protein ftsw | ATY41_06495 | Not Available | Negative | 1946327 - 1947721 | 49966.8 |
| protein phosphatase | ATY41_06500 | Not Available | Negative | 1947708 - 1948952 | 44544.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
