Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | ATY41_06085 | Not Available | Positive | 1866122 - 1867141 | 35881.4 |
| hypothetical protein | ATY41_06090 | Not Available | Positive | 1867263 - 1867511 | 9724.65 |
| hypothetical protein | ATY41_06095 | Not Available | Negative | 1867973 - 1868716 | 27964.7 |
| hypothetical protein | ATY41_06100 | Not Available | Negative | 1868729 - 1869571 | 31102.0 |
| hypothetical protein | ATY41_06105 | Not Available | Negative | 1870504 - 1870770 | 10140.0 |
| hypothetical protein | ATY41_06110 | Not Available | Negative | 1870776 - 1871543 | 27912.4 |
| hypothetical protein | ATY41_06115 | Not Available | Positive | 1871768 - 1871992 | 7781.43 |
| hypothetical protein | ATY41_06120 | Not Available | Negative | 1872003 - 1872191 | 7160.8 |
| hypothetical protein | ATY41_06125 | Not Available | Negative | 1872535 - 1872990 | 16468.2 |
| hypothetical protein | ATY41_06130 | Not Available | Positive | 1873887 - 1874300 | 13877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
