Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | ATY41_05900 | Not Available | Negative | 1829162 - 1830856 | 58944.9 |
| trehalose phosphatase | ATY41_05905 | Not Available | Negative | 1830955 - 1831758 | 27956.0 |
| trehalose-phosphate synthase | ATY41_05910 | Not Available | Negative | 1831795 - 1833312 | 56620.6 |
| hydrolase | ATY41_05915 | Not Available | Negative | 1833742 - 1834428 | 23555.7 |
| arsenic transporter | ATY41_05920 | Not Available | Negative | 1834583 - 1835737 | 40124.5 |
| hypothetical protein | ATY41_05925 | Not Available | Positive | 1835829 - 1836017 | 6864.49 |
| hypothetical protein | ATY41_05930 | Not Available | Positive | 1836124 - 1836558 | 15462.4 |
| glucoamylase | ATY41_05940 | Not Available | Positive | 1838002 - 1839777 | 65718.5 |
| atp-dependent clp protease adaptor clps | ATY41_05945 | Not Available | Positive | 1839777 - 1840070 | 11015.2 |
| hypothetical protein | ATY41_05950 | Not Available | Positive | 1840067 - 1840570 | 17995.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
