Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | ATY41_04260 | Not Available | Negative | 1475330 - 1475821 | 18038.5 |
| hypothetical protein | ATY41_04265 | Not Available | Negative | 1475872 - 1477206 | 48052.6 |
| pyruvate carboxylase | ATY41_04270 | Not Available | Negative | 1477241 - 1480645 | 122087.0 |
| chromosome partitioning protein para | ATY41_04275 | Not Available | Positive | 1480726 - 1481535 | 28939.0 |
| transcriptional regulator | ATY41_04280 | Not Available | Negative | 1481641 - 1482192 | 19592.1 |
| merr family transcriptional regulator | ATY41_04285 | Not Available | Negative | 1482320 - 1483012 | 24998.3 |
| transcriptional regulator | ATY41_04290 | Not Available | Negative | 1483012 - 1483461 | 16137.7 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ATY41_04295 | Not Available | Negative | 1483520 - 1484149 | 22796.2 |
| hypothetical protein | ATY41_04300 | Not Available | Negative | 1484276 - 1484773 | 17986.3 |
| hypothetical protein | ATY41_04305 | Not Available | Positive | 1484843 - 1485325 | 17182.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
