Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| division/cell wall cluster transcriptional repressor mraz | ATY41_04210 | Not Available | Negative | 1463994 - 1464425 | 16043.1 |
| hypothetical protein | ATY41_04215 | Not Available | Negative | 1464769 - 1465146 | 13495.5 |
| geranylgeranyl pyrophosphate synthase | ATY41_04220 | Not Available | Positive | 1465227 - 1466345 | 39752.2 |
| transcriptional regulator | ATY41_04225 | Not Available | Negative | 1466358 - 1466699 | 12311.8 |
| hypothetical protein | ATY41_04230 | Not Available | Positive | 1466849 - 1467910 | 35961.4 |
| serine/threonine protein kinase | ATY41_04235 | Not Available | Positive | 1467996 - 1469897 | 66383.3 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ATY41_04240 | Not Available | Negative | 1470063 - 1471388 | 49012.1 |
| hypothetical protein | ATY41_04245 | Not Available | Negative | 1471529 - 1472218 | 24954.5 |
| glucokinase | ATY41_04250 | Not Available | Negative | 1472261 - 1473211 | 32705.2 |
| long-chain fatty acid--coa ligase | ATY41_04255 | Not Available | Positive | 1473366 - 1475192 | 65598.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
