Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_03970 | Not Available | Positive | 1399427 - 1399732 | 11477.0 |
| hypothetical protein | ATY41_03975 | Not Available | Negative | 1400457 - 1400822 | 13689.2 |
| hypothetical protein | ATY41_03980 | Not Available | Negative | 1400906 - 1401205 | 11046.2 |
| hypothetical protein | ATY41_03985 | Not Available | Negative | 1401327 - 1401716 | 13868.3 |
| hypothetical protein | ATY41_03990 | Not Available | Negative | 1401952 - 1402158 | 7072.5 |
| hypothetical protein | ATY41_03995 | Not Available | Negative | 1402192 - 1403148 | 33925.2 |
| hypothetical protein | ATY41_04000 | Not Available | Negative | 1403150 - 1403566 | 14052.6 |
| hypothetical protein | ATY41_04005 | Not Available | Negative | 1404163 - 1404354 | 6903.24 |
| hypothetical protein | ATY41_04010 | Not Available | Negative | 1404592 - 1404861 | 9543.28 |
| hypothetical protein | ATY41_04015 | Not Available | Negative | 1404861 - 1405970 | 40233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
