Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | subsp. xyli strain gdw1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
316022 bp
Thymine Count
319337 bp
Guanine Count
659667 bp
Cytosine Count
662381 bp
Genome Length
1957407 bp
Protein-coding Genes
1617 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATY41_11900 | Not Available | Negative | 1183035 - 1183685 | 24056.8 |
| hypothetical protein | ATY41_11905 | Not Available | Positive | 1183832 - 1184509 | 24652.1 |
| serine protease | ATY41_11910 | Not Available | Negative | 1184669 - 1185850 | 39244.6 |
| hypothetical protein | ATY41_11915 | Not Available | Negative | 1185935 - 1186594 | 21384.9 |
| rok family transcriptional regulator | ATY41_11920 | Not Available | Positive | 1186704 - 1187987 | 44493.1 |
| sugar abc transporter permease | ATY41_11935 | Not Available | Positive | 1190407 - 1191243 | 30038.5 |
| hypothetical protein | ATY41_11940 | Not Available | Positive | 1191317 - 1191625 | 10869.8 |
| hypothetical protein | ATY41_11955 | Not Available | Positive | 1195050 - 1195406 | 12114.5 |
| multidrug abc transporter atp-binding protein | ATY41_11960 | Not Available | Positive | 1196343 - 1198073 | 62056.1 |
| multidrug abc transporter atp-binding protein | ATY41_11965 | Not Available | Positive | 1198075 - 1200054 | 72300.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
