Trueperella bernardiae strain LCDC 89-0504

spheremicroaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Trueperella

Description

Trueperella bernardiae strain LCDC 89-0504 is a spherical, non-spore-forming microbe that exhibits microaerophilic growth characteristics. This strain thrives in environments with low oxygen tension, which is typical of certain ecological niches where oxygen levels are limited but not absent. The spherical shape of T. bernardiae suggests a potential adaptation to its microaerophilic lifestyle, as such morphology may facilitate efficient nutrient uptake and metabolic processes in oxygen-restricted conditions. As a member of the genus Trueperella, this strain is likely to engage in complex interactions with its surrounding microbial community, potentially influencing local microbial dynamics through its metabolic activities. The absence of sporulation in this strain may indicate a reliance on stable, favorable conditions for growth, as opposed to the survival strategies often employed by spore-forming bacteria that allow them to endure harsh environments. Understanding the specific growth conditions and ecological roles of Trueperella bernardiae strain LCDC 89-0504 can provide valuable insights into its potential applications in biotechnology or its role in specific ecological contexts. Further research into its metabolic capabilities and interactions with other microorganisms could elucidate its importance in microaerophilic environments, potentially revealing novel functions within microbial consortia.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusTrueperella
SpeciesTrueperella bernardiae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trueperella bernardiae strain LCDC 89-0504

Accession NumberLNIZ00000000.1

Gene Summary

Adenine Count

349931 bp

Thymine Count

351199 bp

Guanine Count

668862 bp

Cytosine Count

658882 bp

Genome Length

2028874 bp

Protein-coding Genes

1754 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail associated lysozymeAQZ59_01778Not Available-1981278 - 1984109100720.0
Distal tail proteinAQZ59_01779Not Available-1984181 - 198487324506.4
Tape measure proteinAQZ59_01780Not Available-1984873 - 198755192993.0
hypothetical proteinAQZ59_01781Not Available-1988271 - 198868414959.8
Major tail proteinAQZ59_01782Not Available-1988697 - 198929021001.5
hypothetical proteinAQZ59_01783Not Available-1989304 - 198964512528.0
hypothetical proteinAQZ59_01784Not Available-1989642 - 199007915556.7
phage head-tail joining proteinAQZ59_01785Not Available-1990079 - 199041111983.3
phage gp6-like head-tail connector proteinAQZ59_01786Not Available-1990423 - 199074011727.7
Phage major capsid proteinAQZ59_01787Not Available-1990773 - 199199944553.5

Displaying genes 1 – 10 of 1814 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

156 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da

Displaying 1–10 of 156 metabolites