Pedobacter ginsenosidimutans strain KACC 14530

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter ginsenosidimutans strain KACC 14530 is a Gram-negative, non-motile bacterium characterized by its rod shape. This strain is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, categorizing it as mesophilic given its temperature range. It possesses a single replicon and is classified as non-spore-forming, indicating that it does not produce spores as part of its reproductive cycle. The presence of flagella suggests that the organism has the potential for mobility in a broader context, although it is described as non-motile in this particular strain, implying that any flagella may not be functional for movement. The sequencing data for this strain is accessible under the accession number LMZQ00000000.1. Biologically, the characteristics of Pedobacter ginsenosidimutans strain KACC 14530 may suggest its role in the degradation of organic materials in aerobic environments, potentially contributing to nutrient cycling in ecosystems where it is found. Its non-spore-forming nature may indicate a reliance on consistent environmental conditions for survival, reflecting its adaptation to mesophilic habitats. Understanding such traits can provide insights into the ecological roles of specific bacterial strains within their environments, particularly in relation to their interactions with organic matter and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter ginsenosidimutans
Strainstrain KACC 14530

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Pedobacter ginsenosidimutans strain KACC 14530
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter ginsenosidimutans strain KACC 14530 contig86, whole

Gene Summary

Adenine Count

2001689 bp

Thymine Count

1994959 bp

Guanine Count

1241729 bp

Cytosine Count

1279176 bp

Genome Length

6517553 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASU31_16910Not AvailableNegative3946644 - 394741730151.5
gnat family acetyltransferaseASU31_16915Not AvailableNegative3947535 - 394795716044.0
hypothetical proteinASU31_16920Not AvailableNegative3947932 - 394843818800.5
class ii fructose-bisphosphate aldolaseASU31_16925Not AvailableNegative3948586 - 394966539772.2
acetyl-coenzyme a carboxylase carboxyl transferase subunit betaASU31_16930Not AvailablePositive3949987 - 395083231211.0
hypothetical proteinASU31_16935Not AvailablePositive3951411 - 395187517166.0
peptidase m28ASU31_16940Not AvailablePositive3952111 - 395365856499.4
cytochrome d ubiquinol oxidase subunit iiASU31_16945Not AvailableNegative3953868 - 395487237577.0
cytochrome bd ubiquinol oxidase subunit iASU31_16950Not AvailableNegative3954962 - 395628148645.6
mbl fold metallo-hydrolaseASU31_16955Not AvailableNegative3956717 - 395761633266.4

Displaying genes 3361 – 3370 of 5322 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.