Pedobacter ginsenosidimutans strain KACC 14530

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter ginsenosidimutans strain KACC 14530 is a Gram-negative, non-motile bacterium characterized by its rod shape. This strain is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, categorizing it as mesophilic given its temperature range. It possesses a single replicon and is classified as non-spore-forming, indicating that it does not produce spores as part of its reproductive cycle. The presence of flagella suggests that the organism has the potential for mobility in a broader context, although it is described as non-motile in this particular strain, implying that any flagella may not be functional for movement. The sequencing data for this strain is accessible under the accession number LMZQ00000000.1. Biologically, the characteristics of Pedobacter ginsenosidimutans strain KACC 14530 may suggest its role in the degradation of organic materials in aerobic environments, potentially contributing to nutrient cycling in ecosystems where it is found. Its non-spore-forming nature may indicate a reliance on consistent environmental conditions for survival, reflecting its adaptation to mesophilic habitats. Understanding such traits can provide insights into the ecological roles of specific bacterial strains within their environments, particularly in relation to their interactions with organic matter and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter ginsenosidimutans
Strainstrain KACC 14530

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Pedobacter ginsenosidimutans strain KACC 14530
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter ginsenosidimutans strain KACC 14530 contig86, whole

Gene Summary

Adenine Count

2001689 bp

Thymine Count

1994959 bp

Guanine Count

1241729 bp

Cytosine Count

1279176 bp

Genome Length

6517553 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporterASU31_14830Not AvailableNegative3398347 - 339921631657.4
riboflavin biosynthesis protein ribdASU31_14835Not AvailableNegative3399217 - 340026939425.3
hypothetical proteinASU31_14840Not AvailablePositive3400350 - 340121032488.5
tyrosine recombinase xerdASU31_14845Not AvailableNegative3401333 - 340223233809.3
3-dehydroquinate dehydrataseASU31_14850Not AvailablePositive3402282 - 340269815249.3
hypothetical proteinASU31_14855Not AvailablePositive3402712 - 340343127294.8
glycosyl transferase family 2ASU31_14860Not AvailableNegative3403428 - 340444138834.6
lauroyl acyltransferaseASU31_14865Not AvailableNegative3404450 - 340532234162.1
hypothetical proteinASU31_14875Not AvailableNegative3406005 - 340845590676.1
hypothetical proteinASU31_14880Not AvailableNegative3408579 - 341099990310.0

Displaying genes 2951 – 2960 of 5322 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.