Paenibacillus sp. Soil787

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. Soil787 is characterized by having a single replicon, indicating a streamlined genomic structure which is typical for many members of the Paenibacillus genus. This genus is known for its diverse metabolic capabilities and ecological versatility, often found in soil environments. The accession number for Paenibacillus sp. Soil787 is LMSP00000000.1, which allows for the tracking and referencing of its genomic data in biological databases. This unique identifier is crucial for researchers who may wish to study its genetic makeup or compare it with other strains within the Paenibacillus genus or related taxa. Paenibacillus species are recognized for their roles in soil health and plant growth promotion. They can engage in nitrogen fixation and contribute to nutrient cycling, which is essential for maintaining soil fertility. The presence of Paenibacillus sp. Soil787 in soil ecosystems suggests it may play a role in enhancing soil biological activity and promoting plant health, although specific functional traits of this strain are not detailed. In summary, the single replicon and the accession number LMSP00000000.1 provide foundational insights into Paenibacillus sp. Soil787, highlighting its potential importance in soil ecology. The species' metabolic versatility and contributions to soil health underscore its ecological significance, warranting further exploration of its specific functions within its native environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. Soil787
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. Soil787


Gene Summary

Adenine Count

2127327 bp

Thymine Count

2126848 bp

Guanine Count

1702875 bp

Cytosine Count

1705632 bp

Genome Length

7664053 bp

Protein-coding Genes

6429 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive27 - 1666Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive226 - 342Not Available
Trna-alaNot AvailableNot AvailablePositive430 - 502Not Available
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive433 - 850Not Available
hypothetical proteinASG93_00010Not AvailablePositive713 - 100010916.7
hypothetical proteinASG93_00015Not AvailablePositive1016 - 153119598.3
hypothetical proteinASG93_00020O07570Positive1773 - 359970517.3
5s ribosomal rnaNot AvailableNot AvailablePositive2902 - 3018Not Available
hypothetical proteinASG93_00025Not AvailablePositive3660 - 406115739.3
hypothetical proteinASG93_00030Not AvailableNegative4079 - 433910467.0

Displaying genes 1 – 10 of 3457 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

160 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da

Displaying 1–10 of 160 metabolites

Health Effects

No health effects information available for this bacterium.