Leifsonia sp. Leaf325

Bacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leifsonia

Description

Leifsonia sp. Leaf325 is characterized as a bacilli-shaped bacterium. It possesses a single replicon, indicating a streamlined genetic organization that is typical for certain bacterial species. The genomic data for Leifsonia sp. Leaf325 is accessible under the accession number LMOK00000000.1. The genus Leifsonia is known for its ecological roles, particularly in soil and plant-associated environments. Members of this genus often contribute to nutrient cycling and may have interactions with plant roots, which can influence plant health and growth. The specific traits of Leifsonia sp. Leaf325, particularly its bacilli morphology and single replicon structure, suggests it may have specialized adaptations for its ecological niche. Understanding the genomic features and physical characteristics of Leifsonia sp. Leaf325 can provide insights into its potential applications in agriculture, such as promoting plant growth or bioremediation strategies. The study of such bacteria is critical for harnessing their beneficial properties in sustainable practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeifsonia
SpeciesLeifsonia sp. Leaf325
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leifsonia sp. Leaf325 contig_5, whole genome shotgun sequence.

Gene Summary

Adenine Count

584590 bp

Thymine Count

582276 bp

Guanine Count

1284454 bp

Cytosine Count

1278190 bp

Genome Length

3732125 bp

Protein-coding Genes

3301 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridine nucleotide-disulfide oxidoreductaseASF62_05650A7Z1S7Positive1217142 - 121820938006.0
hypothetical proteinASF62_05655A4Y6Z6Negative1218233 - 121860112622.9
hypothetical proteinASF62_05660Q8UFC8Negative1218598 - 121901714104.7
padr family transcriptional regulatorASF62_05675Not AvailableNegative1221776 - 122239022435.3
merr family transcriptional regulatorASF62_05685P71039Positive1223472 - 122423028153.8
gntr family transcriptional regulatorASF62_05695Q72LL6Positive1225391 - 122686652546.6
fe-s cluster assembly protein hesbASF62_05700Not AvailableNegative1226886 - 122745220144.8
hypothetical proteinASF62_05710Not AvailablePositive1230914 - 123138717584.7
atpaseASF62_05715Not AvailableNegative1231475 - 123368276186.3
formimidoylglutamaseASF62_05720Not AvailablePositive1233802 - 123478234059.9

Displaying genes 1101 – 1110 of 3350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

216 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 216 metabolites

Health Effects

No health effects information available for this bacterium.