Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. Leaf294 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593329 bp
Thymine Count
590624 bp
Guanine Count
1460713 bp
Cytosine Count
1463557 bp
Genome Length
4108248 bp
Protein-coding Genes
3713 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | ASF42_09635 | Not Available | Positive | 2022099 - 2022971 | 32269.1 |
| naphthoate synthase | ASF42_09645 | Not Available | Positive | 2024343 - 2025254 | 33558.3 |
| hypothetical protein | ASF42_09650 | Not Available | Positive | 2025286 - 2026422 | 38945.5 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | ASF42_09655 | Not Available | Positive | 2026488 - 2027435 | 33126.1 |
| hypothetical protein | ASF42_09660 | Not Available | Negative | 2027548 - 2027844 | 10918.3 |
| hypothetical protein | ASF42_09665 | Not Available | Positive | 2027956 - 2028327 | 14036.9 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | ASF42_09670 | Not Available | Positive | 2028320 - 2030029 | 60122.7 |
| isochorismate synthase | ASF42_09675 | Not Available | Negative | 2030184 - 2031437 | 43006.5 |
| ubiquinone biosynthesis methyltransferase ubie | ASF42_09680 | Not Available | Positive | 2031662 - 2032384 | 25895.8 |
| geranylgeranyl pyrophosphate synthase | ASF42_09685 | Not Available | Positive | 2032425 - 2033513 | 38869.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
