Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ASE92_04880 | A6GW82 | Negative | 1140024 - 1141073 | 39921.1 |
| abc transporter | ASE92_04885 | Q3ATR5 | Positive | 1141270 - 1142517 | 46269.3 |
| aspartate aminotransferase | ASE92_04890 | A3PMF8 | Negative | 1142696 - 1143838 | 41863.7 |
| cation diffusion facilitator family transporter | ASE92_04895 | Not Available | Positive | 1144059 - 1144991 | 34978.6 |
| nudix hydrolase | ASE92_04900 | Not Available | Positive | 1144978 - 1145421 | 16879.1 |
| atpase | ASE92_04905 | Not Available | Negative | 1145433 - 1145864 | 16735.7 |
| extradiol dioxygenase | ASE92_04910 | Not Available | Negative | 1145888 - 1146304 | 15379.4 |
| hypothetical protein | ASE92_04915 | Not Available | Negative | 1146394 - 1146747 | 13220.7 |
| dna polymerase iii subunit epsilon | ASE92_04920 | Q5HP88 | Negative | 1146906 - 1148279 | 51774.2 |
| hypothetical protein | ASE92_04925 | Not Available | Negative | 1148448 - 1149026 | 20690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

