Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein cina | ASE92_04730 | Q5LCF4 | Positive | 1108720 - 1109973 | 46001.9 |
| diapophytoene dehydrogenase | ASE92_04735 | P37942 | Positive | 1110021 - 1111370 | 48740.3 |
| thioredoxin | ASE92_04740 | P52232 | Positive | 1111486 - 1111782 | 10854.3 |
| phosphoesterase | ASE92_04745 | Not Available | Negative | 1111783 - 1112421 | 24040.1 |
| dna ligase-associated dexh box helicase | ASE92_04750 | O27830 | Negative | 1112489 - 1114966 | 93628.3 |
| atp-dependent dna ligase | ASE92_04755 | Q1II25 | Negative | 1115133 - 1116722 | 61023.2 |
| dna ligase-associated dexh box helicase | ASE92_04760 | Not Available | Negative | 1116719 - 1117774 | 39455.6 |
| hypothetical protein | ASE92_04765 | Not Available | Positive | 1117928 - 1118539 | 22631.6 |
| hypothetical protein | ASE92_04770 | Not Available | Positive | 1118539 - 1119249 | 26990.9 |
| hypothetical protein | ASE92_04775 | Not Available | Negative | 1119279 - 1119458 | 6721.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

