Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s9 | ASE92_04275 | Not Available | Negative | 1004252 - 1007116 | 107497.0 |
| merr family transcriptional regulator | ASE92_04280 | Not Available | Negative | 1007329 - 1007664 | 13131.9 |
| alanine--trna ligase | ASE92_04285 | Q11V49 | Positive | 1007780 - 1010395 | 98459.0 |
| epoxyqueuosine reductase | ASE92_04290 | E6X4P3 | Negative | 1010499 - 1011431 | 35441.2 |
| hypothetical protein | ASE92_04295 | Not Available | Positive | 1011568 - 1011774 | 7550.98 |
| carbon-nitrogen hydrolase | ASE92_04300 | P54608 | Negative | 1011973 - 1013481 | 57548.1 |
| atp-dependent dna helicase ruvb | ASE92_04305 | A6H1G3 | Negative | 1013853 - 1014875 | 37395.8 |
| 3-hydroxybutyryl-coa dehydrogenase | ASE92_04310 | P45856 | Negative | 1014913 - 1015800 | 32028.0 |
| pyridoxine 5'-phosphate oxidase | ASE92_04315 | Q04R37 | Negative | 1016123 - 1016773 | 24930.5 |
| hypothetical protein | ASE92_04320 | Q11U74 | Positive | 1016820 - 1017383 | 21166.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

