Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | ASE92_00360 | Q11QN5 | Positive | 85878 - 86264 | 14161.4 |
| 30s ribosomal protein s2 | ASE92_00365 | Q11QN6 | Positive | 86283 - 87143 | 31789.5 |
| elongation factor ts | ASE92_00370 | Q11QN7 | Positive | 87241 - 88086 | 29845.7 |
| n-acetylglucosamine-6-phosphate deacetylase | ASE92_00375 | O32445 | Positive | 88219 - 89313 | 40016.6 |
| uridylate kinase | ASE92_00380 | Q11XK2 | Positive | 89378 - 90082 | 25927.7 |
| ribosome-recycling factor | ASE92_00385 | A5FMF6 | Positive | 90119 - 90682 | 20695.0 |
| laci family transcriptional regulator | ASE92_00390 | Q87QW9 | Negative | 90724 - 91764 | 39391.5 |
| hypothetical protein | ASE92_00395 | Not Available | Positive | 91767 - 91979 | 8110.84 |
| transcriptional regulator | ASE92_00400 | P44337 | Positive | 92423 - 92899 | 17914.9 |
| iron transporter feob | ASE92_00405 | Q5XPH7 | Negative | 93084 - 95186 | 77852.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

