Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | ASE92_19900 | Q9PKI5 | Negative | 4759404 - 4760636 | 46753.6 |
| udp-glucose 6-dehydrogenase | ASE92_19905 | O86422 | Positive | 4760700 - 4762010 | 48275.0 |
| nad-dependent dehydratase | ASE92_19910 | Q8NBZ7 | Positive | 4762012 - 4763001 | 37278.8 |
| udp-glucose 4-epimerase | ASE92_19915 | Q9CNY5 | Positive | 4763004 - 4764026 | 37260.1 |
| hypothetical protein | ASE92_19920 | Not Available | Positive | 4764027 - 4764584 | 21489.3 |
| capsular biosynthesis protein | ASE92_19925 | Not Available | Positive | 4764602 - 4765339 | 27907.8 |
| abc transporter | ASE92_19930 | Q6F813 | Negative | 4765364 - 4766593 | 43665.9 |
| [fe-s]-binding protein | ASE92_19935 | Q65SZ6 | Negative | 4766696 - 4767049 | 12799.1 |
| hypothetical protein | ASE92_19940 | Not Available | Positive | 4767141 - 4767671 | 20143.8 |
| methylmalonyl-coa mutase | ASE92_19945 | I3VE77 | Positive | 4767792 - 4769339 | 57062.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

