Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | ASE92_19140 | Not Available | Negative | 4590125 - 4590811 | 26225.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ASE92_19145 | A5FAQ5 | Negative | 4590948 - 4591763 | 29639.9 |
| carbamoyl phosphate synthase small subunit | ASE92_19150 | Q31LB7 | Positive | 4592073 - 4593185 | 41228.1 |
| abc transporter atp-binding protein | ASE92_19155 | Q1BWI2 | Positive | 4593386 - 4594150 | 28482.3 |
| abc transporter permease | ASE92_19160 | Not Available | Positive | 4594294 - 4595370 | 39169.8 |
| hypothetical protein | ASE92_19165 | Not Available | Positive | 4595527 - 4596207 | 25413.2 |
| tetr family transcriptional regulator | ASE92_19170 | Not Available | Negative | 4596204 - 4596779 | 21992.5 |
| hypothetical protein | ASE92_19175 | Not Available | Negative | 4596779 - 4597186 | 14535.6 |
| phenylalanine--trna ligase subunit alpha | ASE92_19180 | A6LA92 | Negative | 4597189 - 4598229 | 39490.1 |
| 2-amino-3-ketobutyrate coa ligase | ASE92_19185 | P0AB78 | Negative | 4598379 - 4599566 | 43365.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

