Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein apbe | ASE92_18075 | B5XP00 | Negative | 4344617 - 4345624 | 36842.8 |
| hypothetical protein | ASE92_18080 | Not Available | Negative | 4345685 - 4346809 | 42837.3 |
| hypothetical protein | ASE92_18085 | Not Available | Negative | 4346847 - 4347206 | 13416.4 |
| d-alanyl-d-alanine carboxypeptidase | ASE92_18090 | P45161 | Negative | 4347209 - 4348618 | 50723.7 |
| cdp-alcohol phosphatidyltransferase | ASE92_18095 | Not Available | Negative | 4348938 - 4349555 | 23295.5 |
| aspartate-semialdehyde dehydrogenase | ASE92_18100 | O67716 | Negative | 4349595 - 4350584 | 36330.2 |
| hypothetical protein | ASE92_18105 | Not Available | Positive | 4350634 - 4351641 | 36925.0 |
| xylose isomerase | ASE92_18110 | Not Available | Negative | 4351733 - 4352602 | 32229.6 |
| xylose isomerase | ASE92_18115 | Not Available | Negative | 4352614 - 4353486 | 32254.9 |
| hydroxypyruvate isomerase | ASE92_18120 | Not Available | Negative | 4353496 - 4354287 | 29800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

