Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme transporter ccmd | ASE92_01815 | P98053 | Positive | 396305 - 397543 | 46185.1 |
| cytochrome c oxidase subunit i | ASE92_01820 | P98000 | Positive | 397660 - 399444 | 66724.6 |
| cytochrome oxidase assembly protein | ASE92_01825 | Not Available | Positive | 399527 - 400585 | 39701.5 |
| polyprenyltransferase | ASE92_01830 | Q11SZ7 | Positive | 400597 - 401505 | 33665.2 |
| cytochrome c oxidase subunit iii | ASE92_01835 | Not Available | Positive | 401509 - 402087 | 21603.1 |
| cytochrome oxidase subunit iii | ASE92_01840 | E0TW65 | Positive | 402119 - 402826 | 26818.8 |
| caa(3)-type oxidase | ASE92_01845 | Not Available | Positive | 402851 - 403207 | 13605.2 |
| hypothetical protein | ASE92_01850 | Not Available | Positive | 403207 - 403902 | 26323.4 |
| hypothetical protein | ASE92_01855 | O31845 | Positive | 403959 - 404495 | 20023.5 |
| rna polymerase subunit sigma-24 | ASE92_01860 | Not Available | Positive | 404614 - 405216 | 23390.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

