Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | ASE92_16795 | Q7T6X9 | Negative | 4045339 - 4046385 | 39731.1 |
| methionyl-trna formyltransferase | ASE92_16800 | Q5L975 | Positive | 4046474 - 4047382 | 33684.8 |
| 4-amino-4-deoxychorismate lyase | ASE92_16805 | Q9ASR4 | Negative | 4047406 - 4048245 | 31811.4 |
| rna pseudouridine synthase | ASE92_16810 | O50310 | Negative | 4048249 - 4049277 | 39134.9 |
| 1-aminocyclopropane-1-carboxylate deaminase | ASE92_16815 | Q9V2L2 | Positive | 4049643 - 4050512 | 32508.4 |
| l-lysine 6-transaminase | ASE92_16820 | P63510 | Positive | 4050761 - 4052092 | 50222.1 |
| hypothetical protein | ASE92_16825 | Not Available | Positive | 4052095 - 4052496 | 15214.6 |
| acyl-coa dehydrogenase | ASE92_16830 | Q96329 | Negative | 4052859 - 4054223 | 50371.3 |
| bacillithiol biosynthesis deacetylase bshb1 | ASE92_16835 | P42981 | Negative | 4054395 - 4055111 | 26855.2 |
| glutathione peroxidase | ASE92_16840 | Q9Z9N7 | Negative | 4055111 - 4055629 | 19822.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

