Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASE92_16645 | Not Available | Positive | 4013720 - 4014082 | 13387.3 |
| short-chain dehydrogenase | ASE92_16650 | Q4A054 | Positive | 4014126 - 4014827 | 25135.8 |
| hypothetical protein | ASE92_16655 | Not Available | Positive | 4014945 - 4015319 | 13377.8 |
| hydrolase | ASE92_16660 | Not Available | Positive | 4015433 - 4015978 | 19970.3 |
| hypothetical protein | ASE92_16665 | Not Available | Negative | 4015981 - 4016589 | 23304.5 |
| flavin reductase | ASE92_16670 | Not Available | Negative | 4016614 - 4017501 | 32433.2 |
| fumarylacetoacetate hydrolase | ASE92_16675 | Q96GK7 | Negative | 4018096 - 4019091 | 36929.4 |
| hypothetical protein | ASE92_16680 | Not Available | Negative | 4019156 - 4019611 | 17011.3 |
| homogentisate 1,2-dioxygenase | ASE92_16685 | Q97Y16 | Positive | 4019879 - 4021045 | 44785.2 |
| 4-hydroxyphenylpyruvate dioxygenase | ASE92_16690 | Q53586 | Positive | 4021215 - 4022345 | 42638.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

