Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | ASE92_16140 | A6L5X6 | Negative | 3909370 - 3910173 | 29635.6 |
| thymidylate synthase | ASE92_16145 | Q11VK5 | Positive | 3910386 - 3911180 | 30146.1 |
| hypothetical protein | ASE92_16150 | Not Available | Positive | 3911289 - 3911669 | 14636.5 |
| dihydrofolate reductase | ASE92_16155 | P11045 | Positive | 3911731 - 3912240 | 19178.8 |
| preprotein translocase subunit secd | ASE92_16160 | D0MIN4 | Positive | 3912689 - 3915667 | 107339.0 |
| nadh dehydrogenase | ASE92_16165 | P95200 | Positive | 3916235 - 3917560 | 49021.6 |
| hydroxymethylglutaryl-coa lyase | ASE92_16170 | P13703 | Positive | 3917751 - 3918611 | 31578.9 |
| gnat family acetyltransferase | ASE92_16175 | Not Available | Negative | 3918774 - 3919196 | 16068.1 |
| hypothetical protein | ASE92_16180 | Not Available | Negative | 3919196 - 3919678 | 17989.7 |
| fructose-bisphosphate aldolase | ASE92_16185 | P44429 | Negative | 3919822 - 3920901 | 39817.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

