Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | ASE92_15520 | Q87WD2 | Positive | 3761720 - 3762958 | 44022.0 |
| phosphoserine phosphatase | ASE92_15525 | Q54UH8 | Negative | 3763035 - 3764336 | 49169.2 |
| nucleoside-diphosphate sugar epimerase | ASE92_15530 | P73212 | Negative | 3764336 - 3765298 | 35438.7 |
| arginase | ASE92_15535 | Not Available | Positive | 3765370 - 3766551 | 44751.8 |
| hypothetical protein | ASE92_15540 | Not Available | Positive | 3766665 - 3767810 | 41514.1 |
| phosphoribosylamine--glycine ligase | ASE92_15545 | P57829 | Negative | 3767894 - 3769165 | 45493.6 |
| short-chain dehydrogenase | ASE92_15550 | Q16698 | Negative | 3769294 - 3770175 | 31590.2 |
| enoyl-coa hydratase | ASE92_15555 | P42125 | Negative | 3770305 - 3771066 | 27870.8 |
| tonb-dependent receptor | ASE92_15560 | Not Available | Negative | 3771152 - 3773842 | 99040.3 |
| deoxycytidine triphosphate deaminase | ASE92_15565 | B2TNM9 | Negative | 3773924 - 3774460 | 20024.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

