Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | ASE92_14495 | B3QXB5 | Negative | 3538470 - 3539495 | 38185.4 |
| hypothetical protein | ASE92_14500 | Not Available | Negative | 3539689 - 3540204 | 19830.2 |
| two-component system response regulator | ASE92_14505 | P13792 | Negative | 3540204 - 3540908 | 27282.1 |
| histidine kinase | ASE92_14510 | P23545 | Negative | 3540917 - 3541783 | 32795.1 |
| glutamate-1-semialdehyde aminotransferase | ASE92_14515 | Q0I3R7 | Negative | 3542286 - 3543656 | 49854.7 |
| delta-aminolevulinic acid dehydratase | ASE92_14520 | P30950 | Negative | 3543746 - 3544714 | 36000.2 |
| porphobilinogen deaminase | ASE92_14525 | C6BYB7 | Negative | 3544928 - 3546511 | 58729.4 |
| hypothetical protein | ASE92_14530 | Not Available | Positive | 3546951 - 3547640 | 25517.1 |
| seryl-trna synthetase | ASE92_14535 | Not Available | Positive | 3547740 - 3548054 | 11584.4 |
| serine--trna ligase | ASE92_14540 | Q2S1G4 | Negative | 3548213 - 3549484 | 47560.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

