Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | ASE92_12395 | P53383 | Negative | 3066523 - 3067599 | 38356.3 |
| penicillin-binding protein | ASE92_12400 | O24849 | Positive | 3067731 - 3069878 | 80480.2 |
| hypoxanthine phosphoribosyltransferase | ASE92_12405 | P37472 | Positive | 3069993 - 3070535 | 20130.3 |
| phosphatidylserine decarboxylase | ASE92_12410 | Q11Y69 | Positive | 3070591 - 3071250 | 24897.3 |
| mechanosensitive ion channel protein mscs | ASE92_12415 | Q57634 | Negative | 3071337 - 3072509 | 44082.1 |
| 50s ribosomal protein l19 | ASE92_12420 | A6LEF2 | Negative | 3072581 - 3072928 | 13072.9 |
| trna (guanine-n1)-methyltransferase | ASE92_12425 | A5FHV7 | Negative | 3073066 - 3073740 | 25031.0 |
| hypothetical protein | ASE92_12430 | Not Available | Negative | 3073915 - 3074526 | 23617.1 |
| 16s rrna processing protein rimm | ASE92_12435 | A6GWI5 | Negative | 3074572 - 3075099 | 20466.4 |
| 30s ribosomal protein s16 | ASE92_12440 | A5FKD9 | Negative | 3075307 - 3075861 | 19713.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

