Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASE92_11535 | Not Available | Positive | 2875314 - 2875631 | 12323.9 |
| proline dehydrogenase | ASE92_11540 | Q86H28 | Negative | 2875966 - 2877153 | 44879.1 |
| rna-binding protein | ASE92_11545 | Not Available | Positive | 2877246 - 2877452 | 7527.31 |
| 3-dehydroquinate synthase | ASE92_11550 | A6LEZ7 | Positive | 2877452 - 2878510 | 39362.1 |
| sterol desaturase | ASE92_11555 | P68434 | Positive | 2878512 - 2879462 | 37172.1 |
| prephenate dehydratase | ASE92_11560 | Not Available | Positive | 2880164 - 2880997 | 31646.1 |
| cytochrome c4 | ASE92_11565 | Q9WYH8 | Positive | 2881102 - 2882241 | 41827.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ASE92_11570 | Q64YD8 | Positive | 2882415 - 2883683 | 46211.9 |
| chorismate synthase | ASE92_11575 | A0M1V5 | Positive | 2883799 - 2884896 | 38946.5 |
| hypothetical protein | ASE92_11580 | Not Available | Positive | 2885205 - 2885810 | 23248.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

