Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | ASE92_11135 | O58010 | Negative | 2791120 - 2791527 | 15020.2 |
| cysteine desulfurase iscs | ASE92_11140 | Q2INI7 | Positive | 2791647 - 2792858 | 44063.9 |
| scaffolding protein | ASE92_11145 | Q9ZD61 | Positive | 2793014 - 2793427 | 14846.7 |
| heme biosynthesis protein hemy | ASE92_11150 | O32113 | Positive | 2793501 - 2793827 | 11916.0 |
| amp-binding protein | ASE92_11155 | P44446 | Positive | 2794257 - 2796173 | 71998.2 |
| hypothetical protein | ASE92_11160 | Not Available | Negative | 2796415 - 2796783 | 13600.3 |
| acyl dehydratase | ASE92_11165 | Q7U2S5 | Positive | 2796938 - 2797396 | 17487.1 |
| lysine--trna ligase | ASE92_11170 | Q5L9E5 | Positive | 2797509 - 2799218 | 64747.8 |
| hypothetical protein | ASE92_11175 | Not Available | Positive | 2799319 - 2799531 | 8271.71 |
| general stress protein | ASE92_11180 | Not Available | Negative | 2799619 - 2800173 | 20364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

