Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf41 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484975 bp
Thymine Count
1489252 bp
Guanine Count
909273 bp
Cytosine Count
896822 bp
Genome Length
4780472 bp
Protein-coding Genes
4031 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa--3-ketoacid-coa transferase | ASE92_09610 | P42315 | Positive | 2409668 - 2410372 | 25438.6 |
| succinyl-coa--3-ketoacid-coa transferase | ASE92_09615 | P63651 | Positive | 2410411 - 2411070 | 23367.7 |
| uridine kinase | ASE92_09620 | A0Q140 | Negative | 2411128 - 2411772 | 24658.4 |
| hypothetical protein | ASE92_09625 | Not Available | Negative | 2411775 - 2413316 | 55956.1 |
| dna starvation/stationary phase protection protein | ASE92_09630 | P45173 | Positive | 2413599 - 2414078 | 18501.1 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | ASE92_09635 | O84087 | Positive | 2414185 - 2416020 | 67739.5 |
| hypothetical protein | ASE92_09640 | Not Available | Positive | 2416123 - 2418489 | 88808.2 |
| hypothetical protein | ASE92_09645 | Not Available | Negative | 2418540 - 2420063 | 55185.4 |
| hypothetical protein | ASE92_09650 | Not Available | Negative | 2420088 - 2421095 | 35986.6 |
| proline--trna ligase | ASE92_09655 | A5FA31 | Positive | 2421294 - 2422766 | 55727.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

